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About mgsm-1
- Information about the software.
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HC3, mismatch hc3 stable vs map from LoadClusRes: ec013.157
- I had a similar problem of the one from the post 'hc-3 ec016.234', but not exactly the same. If i run: data.namepattern = ...
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Re: vim-2 data preprocessing / estimation meaning
- Hi Erick, The BOLD responses have not been deconvolved. In Nishimoto et al. 2011, the stimuli were convolved with hemodynamic response filters after the ...
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hc-3 position/time registration
- Looking at ec013.553 1) The description states that the sampling rate is 30 hertz but I can not find nor figure out how the positions register to the ...
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2017 summer course videos available online
- Course in "Mining and modeling of neuroscience data"
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pvc-3 : Running the DimStim script and function of the neurons
- Hi, I downloaded the data and got the angle of the drifting bar stimulus out of the .din file. But I can't seem to run the Python script. DimStim's ...
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Re: PFC-2 Behavioral Metadata for some sessions
- Hello all, I was wondering if there was any updates to this issue. There are the EE188_Behaivor_PFC.mat and EE210_Behavior_PFC.mat files provided for ...
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Re: ac-1 stimulus type and onset
- Thanks for your interest in our data sets. Analysis sample commands in the Contents.m will be helpful for you to figure out the format of our data. But ...
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Re: alm-1 (anterior lateral motor cortex 1) : use data(spike sorted) for neural decoding
- Previously Nuo Li wrote: Dear Sajad Karami, There are two demo matlab scripts that show how to obtain PSTH and behavioral performance. The demos ...
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vim-1: how to know space location of the voxels
- Hi, I would like to use the EstimatedResponses.mat for analysis. Variable dataTrn is 1,750 x ~25,000 matrix, where 25,000 is the number of voxels. I ...
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hc-6 : what is the exact shape of W-shaped track
- Thank the lab of Loren Frank at UCSF for sharing the data hc-6. Paper: Mattias P. Karlsson and Loren M. Frank, 2009, "Awake replay of remote experiences ...
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Additional electrode sources for pfc-7
- Hello all, Does anyone know if there are any other sources for this dataset which include more electrodes per session? There are some sessions which have ...
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Re: hc-3 - clu files - inconsistency in cluster counts (dataset ec016.233)
- I am not the responsible for this data-set. But as far as I understood the spike sorting and cluster labeling is made over a day of recording. Spike ...
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Re: hc3 - order of channels in .eeg file
- I think the necessary information is in the .xml file provided with each recording. In the documentation, this file is described as the "configuration file ...
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Re: vim-1: how to know space location of the voxels
- Pardon the late reply. We had hoped that this would be obvious, but the indices for the EstimatedResponse voxels in the 64 x 64 x 18 scanned brain volume ...
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Length of behavior files is shorter than the spike index (hc-3/ec013.15)
- Hi to the kind person who can answer this message in the middle of the summer holidays. I am trying to use the data from the repository hc-3/ec013.15. ...
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Re: hc-3 - position file
- The data contributor provides the following answer: The position files (.whl) measure the position in centimeter. The reasons that these files do not ...
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Re: hc-3 ec016.234
- Hi Pranav, Thanks for your interest in our data set. As you wrote, ec016.234 has 61 CA1 cells (or 48 CA1 cells if we use our quality ...
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Re: a question on the single-unit spiking data in ac-3
- Dear Fabiano, Thank you for your interest in the dataset. The spike sorting procedure used in this dataset is a semi-automatic spike sorter based on ...
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th-1 FAQ
- 1) Are the spike times in filename.res.N expressed as multiples of the 20kHz sampling rate, so that time in seconds = (spike time in file) / (20e3)? ...
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Re: Natural movie TR labels
- Hi Natalia, Is there anyway we could get the semantic WordNet movie labels used in Huth et al., 2012 and Huth 2016 paper ...
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hc-3 - clu files - inconsistency in cluster counts (dataset ec016.233)
- Hello. From the documentation, I understand that the first line of a clu file is the number of unique clusters found in that file. I tried the ...
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ofc-1 timing question
- I have a couple quick questions regarding how the trials are aligned. I'm specifically looking at ofc-1/N1/040624 as a starting point. TE = ...
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start time of simultaneous data--hc3
- Hi! The hc3 dataset contains some .whl files that have the locations of a moving rat`s head and body for the duration of a trial, sampled at 36.9 Hz or ...
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Re: ofc-1 data question
- Previously Dmitry Kobak wrote: Hi. TrialEvents.mat files do not include "hundreds of experiments". They describe hundreds of *trials* in one ...
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Re: hc-3 position/time registration
- Previously Jeremy Dobrzanski wrote: Looking at ec013.553 1) The description states that the sampling rate is 30 hertz but I can not find nor figure ...
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Publications
- Publications and online resources (since 2009) based on data sets shared on CRCNS.org.
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pfc-2 CellsInfo for sleep sessions
- Hi everyone, First of all, I want to thank Fujisawa et al for sharing their dataset, and for doing it in such an organized, well-documented way - ...
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Two questions about hc-2
- Thanks very much for Gautam’s reply! But I still have two questions. 1. I'm still confused about the unit of the LFP waveform in the *.eeg files. In the ...
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hc-3: Is there an explanation for missing spikecounts at 40 spks/s?
- Hey crcns-community, this example is taken from the hc-3 data set: animal_id = 'ec014' day = 29 session = 468 I separated each passage from one ...
